clarki is a coralsnake of moderate body size, exhibiting a relatively thin to robust and cylindrical body, with a differentiated head from the neck. It can be distinguished by having a tricolored pattern of red, black, and yellow rings, with a black head cap extending from snout to the posterior tips of the parietal scales, followed by a white nuchal band that does not reach the parietal scales and a black ring encompassing three to six dorsal scales in length (shorter ventrally). The dorsal surfaces exhibit 13–20 black rings along the body, encompassing two to three scales in length (both dorsal and ventral). On the tail, there are five to nine black rings separated by yellow rings. The males and females of M. clarki differ in the number of black tail rings, which are six to nine in males and five to six in females [4,16].
Micrurus multiscutatus, M. multifasciatus and M. mipartitus inhabit the natural geographic range of M. clarki, but they are easily distinguishable by presenting a bicolor ring pattern. M. clarki is different from M. oligoanellatus, because this coralsnake has no black ring on the neck [17]. In Panamá and Colombia, M. clarki is sympatric with M. dumerilii [4]. M. dumerilii has a triadal or monadal pattern (according its geographic distribution) of red, black, and white rings on the body and a bicolored pattern of black and white rings on the tail; while M. clarki, as mentioned above, has a monadal pattern on the body and bicolored pattern on tail, with yellow color rings instead of white rings [17, 18]. In general, adult individuals of M. clarki are larger in body size than sympatric species of the same genus [4]. M. nigrocinctus is another species of coralsnake that could be confused with M. clarki; however, M. nigrocinctus has a black cap that barely reaches the parietals, while in M. clarki the black cap completely covers the parietals [4].